场景 041 · Codex Use Case

确定药物靶点优先级

标准化实体,并行收集遗传、队列、临床、文献和表达证据,分别评分,再形成排名和可复用图表。

SciencesData
Prioritize drug targetsSciencesData

原文核对:2026-10-13 · 中文正文 · 英文提示词与演示

场景定位

标准化实体,并行收集遗传、队列、临床、文献和表达证据,分别评分,再形成排名和可复用图表。

难度
高级
时间跨度
长时间运行

适合用于

  • 需要多类证据支持的靶点优先级问题。
  • 希望并行科学研究后综合结论的团队。
  • 需要原始响应、明确评分规则和可复用视觉材料的科学家。

相关工具

Life Science Research

搜索科学数据库和文献,为通路、转化、可成药性及竞争证据提供依据。

Life Science Research ↗

起步提示词

英文原文 · 可复制后按实际材料修改

Use the Life Science Research plugin to compare TSLP, IL33, and IL1RL1 for asthma target prioritization.

Run these independent lanes in parallel with subagents:
- Human genetics and GWAS: gwas-catalog-skill, opentargets-skill, gnomad-graphql-skill
- Cohort replication and PheWAS: finngen-phewas-skill, ukb-topmed-phewas-skill, biobankjapan-phewas-skill, tpmi-phewas-skill
- Target-disease evidence and disease context: opentargets-skill, efo-ontology-skill
- Clinical and regulatory precedent: clinicaltrials-skill, opentargets-skill, chembl-skill, pharmgkb-skill
- Literature and public-dataset context: ncbi-entrez-skill, ncbi-pmc-skill, biorxiv-skill, ncbi-datasets-skill, biostudies-arrayexpress-skill
- Expression and tissue/cell-type context: human-protein-atlas-skill, gtex-eqtl-skill, cellxgene-skill, bgee-skill

For each lane:
- score TSLP, IL33, IL1RL1 on a 1-5 scale
- keep direct asthma evidence separate from adjacent allergic/atopic phenotypes
- save raw payloads when helpful

Then synthesize:
- a lane-by-target score table
- a final rank of TSLP, IL33, IL1RL1
- a confidence assessment and the main caveats
- two visuals: a prioritization heatmap and a GWAS summary figure with the lead asthma-linked variants for each target

使用技能

Life Science Research 为各证据方向提供技能:

  • 人类遗传与 GWAS:gwas-catalog-skill、opentargets-skill、gnomad-graphql-skill。
  • 队列复现与 PheWAS:finngen-phewas-skill、ukb-topmed-phewas-skill、biobankjapan-phewas-skill、tpmi-phewas-skill。
  • 靶点疾病关联及背景:opentargets-skill、efo-ontology-skill。
  • 临床与监管先例:clinicaltrials-skill、opentargets-skill、chembl-skill、pharmgkb-skill。
  • 文献与公开数据集:ncbi-entrez-skill、ncbi-pmc-skill、biorxiv-skill、ncbi-datasets-skill、biostudies-arrayexpress-skill。
  • 表达与组织/细胞类型:human-protein-atlas-skill、gtex-eqtl-skill、cellxgene-skill、bgee-skill。

可以明确提及技能,或让 ChatGPT 选择调用时机。

操作步骤

  1. 给出具体比较问题、准确靶点、疾病和证据方向。
  2. 调用 Life Science Research,要求子代理并行处理,各自保持明确范围。
  3. 每条证据方向按固定 1–5 分评分,区分直接疾病证据与相邻表型。
  4. 在同一对话中审阅保存的原始响应、证据方向×靶点评分表和综合排名。
展开英文原文对照

Use ChatGPT with the Life Science Research plugin to normalize entities, retrieve genetics, cohort, clinical, literature, and expression evidence in parallel, score each lane, and produce a final ranking with reusable visuals.

Leverage skills

The Life Science Research plugin includes skills for each evidence lane:

  • Human genetics and GWAS: gwas-catalog-skill, opentargets-skill, gnomad-graphql-skill
  • Cohort replication and PheWAS: finngen-phewas-skill, ukb-topmed-phewas-skill, biobankjapan-phewas-skill, tpmi-phewas-skill
  • Target-disease evidence and disease context: opentargets-skill, efo-ontology-skill
  • Clinical and regulatory precedent: clinicaltrials-skill, opentargets-skill, chembl-skill, pharmgkb-skill
  • Literature and public-dataset context: ncbi-entrez-skill, ncbi-pmc-skill, biorxiv-skill, ncbi-datasets-skill, biostudies-arrayexpress-skill
  • Expression and tissue/cell-type context: human-protein-atlas-skill, gtex-eqtl-skill, cellxgene-skill, bgee-skill

Use these skills by mentioning them specifically, or let ChatGPT decide when to use them.

Step-by-step guide

  1. Start with a concrete comparison question and the exact targets, disease, and evidence lanes you want ChatGPT to cover.
  2. Invoke the Life Science Research plugin and tell ChatGPT to run the lanes in parallel with subagents so each evidence family stays bounded.
  3. Ask ChatGPT to score each lane on a fixed 1-5 scale and to keep direct disease evidence separate from adjacent phenotypes.
  4. Review the saved raw payloads, the lane-by-target score table, and the synthesized rank in the same chat.